Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16129 and 16130 are separated by 129 nucleotides16130 and 16131 are separated by 225 nucleotides16131 and 16132 are separated by 870 nucleotides16132 and 16133 are separated by 215 nucleotides mRNA_7761: 16129 - KOG1176 Acyl-CoA synthetase, at 1,006,948 to 1,009,515 16129 mRNA_7762: 16130 - K20302 TRAPPC3, BET3 trafficking protein particle complex subunit 3, at 1,009,645 to 1,010,524 16130 mRNA_7763: 16131 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 1,010,750 to 1,013,184 16131 mRNA_7764: 16132 - Hypothetical Protein, at 1,014,055 to 1,015,066 16132 mRNA_7765: 16133 - KOG0118 FOG RRM domain, at 1,015,282 to 1,015,674 16133
Group Condition mRNA_7761 mRNA_7762 mRNA_7763 mRNA_7764 mRNA_7765
16129 16130 16131 16132 16133
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.4 -1.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.0 -0.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.2 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.2 -0.7 N.D.
growth on ypd YPD -0.2 N.D. +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.2 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.0 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.2 +0.3 N.D.
auxotrophy YNB Glucose +0.4 N.D. +0.1 +0.2 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. +0.1 +0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.2 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.2 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.4 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.2 +0.4 N.D.
auxotrophy Dropout Complete +0.4 N.D. +0.2 +0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.2 +1.3 N.D.
remove
mRNA_7761
plot		 remove
mRNA_7762
plot		 remove
mRNA_7763		 remove
mRNA_7764
plot		 remove
mRNA_7765
plot