Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16135 and 16136 are separated by 189 nucleotides
16136 and 16137 are separated by 113 nucleotides
16137 and 16138 are separated by 305 nucleotides
16138 and 16139 are separated by 834 nucleotides
mRNA_7767: 16135 - ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896, at 1,018,702 to 1,022,173
16135
mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1,022,363 to 1,024,489
16136
mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1,024,603 to 1,026,390
16137
mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1,026,696 to 1,027,876
16138
mRNA_7771: 16139 - HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892, at 1,028,711 to 1,030,372
16139
Group
Condition
mRNA
_7767
mRNA
_7768
mRNA
_7769
mRNA
_7770
mRNA
_7771
16135
16136
16137
16138
16139
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.0
-0.0
N.D.
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.2
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.2
-0.2
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.0
+0.0
N.D.
+0.0
growth on oleic acid
YNB Glucose
-0.2
+0.2
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
+0.1
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
-0.1
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
-0.1
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
-0.5
+0.1
+0.1
N.D.
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.0
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
+0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.1
+0.1
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.3
+0.6
N.D.
-0.5
auxotrophy
YNB Glucose
+0.0
+0.3
-0.1
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.2
+0.0
N.D.
+0.4
growth on ypd
YPD
+0.1
-0.0
+0.3
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.4
N.D.
+0.1
auxotrophy
Dropout Complete
+0.1
+0.4
-0.0
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
+0.2
N.D.
+0.2
remove
mRNA_7767
plot
remove
mRNA_7768
plot
remove
mRNA_7769
remove
mRNA_7770
plot
remove
mRNA_7771
plot