Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16136 and 16137 are separated by 113 nucleotides16137 and 16138 are separated by 305 nucleotides16138 and 16139 are separated by 834 nucleotides16139 and 16140 are separated by 230 nucleotides mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1,022,363 to 1,024,489 16136 mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1,024,603 to 1,026,390 16137 mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1,026,696 to 1,027,876 16138 mRNA_7771: 16139 - HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892, at 1,028,711 to 1,030,372 16139 mRNA_7772: 16140 - Hypothetical Protein, at 1,030,603 to 1,031,384 16140
Group Condition mRNA_7768 mRNA_7769 mRNA_7770 mRNA_7771 mRNA_7772
16136 16137 16138 16139 16140
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 N.D. -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose +0.2 -0.1 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.0 N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.6 N.D. -0.5 N.D.
auxotrophy YNB Glucose +0.3 -0.1 N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. +0.3 N.D.
growth on ypd YPD -0.0 +0.3 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. +0.4 N.D.
auxotrophy Dropout Complete +0.4 -0.0 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.4 N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.2 N.D. +0.2 N.D.
remove
mRNA_7768
plot		 remove
mRNA_7769
plot		 remove
mRNA_7770		 remove
mRNA_7771
plot		 remove
mRNA_7772
plot