Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16138 and 16139 are separated by 834 nucleotides16139 and 16140 are separated by 230 nucleotides16140 and 16141 are separated by 413 nucleotides16141 and 16142 are separated by 194 nucleotides mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1,026,696 to 1,027,876 16138 mRNA_7771: 16139 - HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892, at 1,028,711 to 1,030,372 16139 mRNA_7772: 16140 - Hypothetical Protein, at 1,030,603 to 1,031,384 16140 mRNA_7773: 16141 - K12857 SNRNP40, PRP8BP Prp8 binding protein, at 1,031,798 to 1,033,403 16141 mRNA_7774: 16142 - KOG1546 Metacaspase involved in regulation of apoptosis, at 1,033,598 to 1,035,909 16142
Group Condition mRNA_7770 mRNA_7771 mRNA_7772 mRNA_7773 mRNA_7774
16138 16139 16140 16141 16142
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 N.D. -1.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 N.D. -1.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 N.D. -0.5 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 N.D. -0.7 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 N.D. -0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 N.D. +0.3 -0.1
growth on oleic acid YNB Glucose N.D. -0.2 N.D. -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 N.D. +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.3 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 N.D. +0.1 +0.3
auxotrophy Dropout Complete N.D. +0.3 N.D. -0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. +0.7 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. +0.1 +0.4
growth on ypd YPD N.D. +0.3 N.D. +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 N.D. +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. +1.1 -0.1
auxotrophy YNB Glucose N.D. +0.3 N.D. +0.3 +0.4
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