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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16140 and 16141 are separated by 413 nucleotides
16141 and 16142 are separated by 194 nucleotides
16142 and 16143 are separated by 863 nucleotides
16143 and 16144 are separated by 221 nucleotides
mRNA_7772: 16140 - Hypothetical Protein, at 1,030,603 to 1,031,384
16140
mRNA_7773: 16141 - K12857 SNRNP40, PRP8BP Prp8 binding protein, at 1,031,798 to 1,033,403
16141
mRNA_7774: 16142 - KOG1546 Metacaspase involved in regulation of apoptosis, at 1,033,598 to 1,035,909
16142
mRNA_7775: 16143 - K01673 cynT, can carbonic anhydrase, at 1,036,773 to 1,037,366
16143
mRNA_7776: 16144 - K01899 LSC1 succinyl-CoA synthetase alpha subunit, at 1,037,588 to 1,039,295
16144
Group
Condition
mRNA
_7772
mRNA
_7773
mRNA
_7774
mRNA
_7775
mRNA
_7776
16140
16141
16142
16143
16144
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.5
-0.3
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.2
+0.0
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.0
+0.2
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
-0.3
-0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.4
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.7
+0.1
+0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.3
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.1
+0.1
N.D.
auxotrophy
Dropout Complete
N.D.
-0.2
+0.3
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.3
+0.2
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.3
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
-0.1
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
+0.3
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
-0.0
+0.2
N.D.
growth on ypd
YPD
N.D.
+0.5
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.3
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.7
+0.0
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.5
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.4
+0.3
N.D.
auxotrophy
YNB Glucose
N.D.
+0.3
+0.4
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+1.1
-0.1
+0.1
N.D.
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