Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16142 and 16143 are separated by 863 nucleotides16143 and 16144 are separated by 221 nucleotides16144 and 16145 are separated by 392 nucleotides16145 and 16146 are separated by 31 nucleotides mRNA_7774: 16142 - KOG1546 Metacaspase involved in regulation of apoptosis, at 1,033,598 to 1,035,909 16142 mRNA_7775: 16143 - K01673 cynT, can carbonic anhydrase, at 1,036,773 to 1,037,366 16143 mRNA_7776: 16144 - K01899 LSC1 succinyl-CoA synthetase alpha subunit, at 1,037,588 to 1,039,295 16144 mRNA_7777: 16145 - KOG0769 Predicted mitochondrial carrier protein, at 1,039,688 to 1,041,157 16145 mRNA_7778: 16146 - Hypothetical Protein, at 1,041,189 to 1,043,169 16146
Group Condition mRNA_7774 mRNA_7775 mRNA_7776 mRNA_7777 mRNA_7778
16142 16143 16144 16145 16146
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.5 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.2 N.D. N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 N.D. N.D. -0.5
growth on ypd YPD +0.1 -0.2 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 N.D. N.D. -0.1
auxotrophy Dropout Complete +0.3 +0.1 N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 N.D. N.D. +0.4
growth on oleic acid YNB Glucose +0.3 +0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.3 +0.2 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.2 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 N.D. N.D. +0.1
auxotrophy YNB Glucose +0.4 +0.3 N.D. N.D. +0.1
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