Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16148 and 16149 are separated by 36 nucleotides
16149 and 16150 are separated by 311 nucleotides
16150 and 16151 are separated by 853 nucleotides
16151 and 16152 are separated by 135 nucleotides
mRNA_7780: 16148 - KOG0376 Serine-threonine phosphatase 2A, catalytic subunit, at 1,045,975 to 1,050,892
16148
mRNA_7781: 16149 - K18664 SLH1 antiviral helicase SLH1, at 1,050,929 to 1,056,955
16149
mRNA_7782: 16150 - Hypothetical Protein, at 1,057,267 to 1,057,848
16150
mRNA_7783: 16151 - HMMPfam-Mitochondrial carrier protein-PF00153,SUPERFAMILY--SSF103506, at 1,058,702 to 1,060,371
16151
mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,060,507 to 1,063,006
16152
Group
Condition
mRNA
_7780
mRNA
_7781
mRNA
_7782
mRNA
_7783
mRNA
_7784
16148
16149
16150
16151
16152
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.1
-1.9
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.5
-0.6
-0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.5
-0.0
-0.9
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
-0.9
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.7
-0.0
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.9
+0.1
+0.0
+0.0
auxotrophy
Dropout Complete
+0.2
-0.1
-0.6
+0.1
-0.1
auxotrophy
YNB Glucose
+0.1
-0.3
-0.2
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.4
-0.2
+0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.7
+0.3
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.2
-0.4
+0.2
+0.0
growth on ricinoleic acid
YNB Glucose
+0.2
-0.4
+0.1
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.3
+0.2
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
-0.3
+0.4
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.2
-0.1
-0.5
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
+0.0
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
-0.2
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.2
-0.0
+0.1
+0.3
growth on ypd
YPD
+0.0
-0.1
+0.4
+0.1
+0.3
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.7
+0.0
+0.3
remove
mRNA_7780
plot
remove
mRNA_7781
plot
remove
mRNA_7782
remove
mRNA_7783
plot
remove
mRNA_7784
plot