Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16148 and 16149 are separated by 36 nucleotides16149 and 16150 are separated by 311 nucleotides16150 and 16151 are separated by 853 nucleotides16151 and 16152 are separated by 135 nucleotides mRNA_7780: 16148 - KOG0376 Serine-threonine phosphatase 2A, catalytic subunit, at 1,045,975 to 1,050,892 16148 mRNA_7781: 16149 - K18664 SLH1 antiviral helicase SLH1, at 1,050,929 to 1,056,955 16149 mRNA_7782: 16150 - Hypothetical Protein, at 1,057,267 to 1,057,848 16150 mRNA_7783: 16151 - HMMPfam-Mitochondrial carrier protein-PF00153,SUPERFAMILY--SSF103506, at 1,058,702 to 1,060,371 16151 mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,060,507 to 1,063,006 16152
Group Condition mRNA_7780 mRNA_7781 mRNA_7782 mRNA_7783 mRNA_7784
16148 16149 16150 16151 16152
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 -1.9 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.5 -0.6 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.5 -0.0 -0.9 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.9 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.7 -0.0 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.9 +0.1 +0.0 +0.0
auxotrophy Dropout Complete +0.2 -0.1 -0.6 +0.1 -0.1
auxotrophy YNB Glucose +0.1 -0.3 -0.2 -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 -0.2 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.7 +0.3 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 -0.4 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.4 +0.1 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.3 +0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.3 +0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.2 -0.1 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 +0.0 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.2 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.0 +0.1 +0.3
growth on ypd YPD +0.0 -0.1 +0.4 +0.1 +0.3
growth on oleic acid YNB Glucose +0.2 -0.0 +0.7 +0.0 +0.3
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