Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16151 and 16152 are separated by 135 nucleotides
16152 and 16153 are separated by 426 nucleotides
16153 and 16154 are separated by 565 nucleotides
16154 and 16155 are separated by 450 nucleotides
mRNA_7783: 16151 - HMMPfam-Mitochondrial carrier protein-PF00153,SUPERFAMILY--SSF103506, at 1,058,702 to 1,060,371
16151
mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,060,507 to 1,063,006
16152
mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,063,433 to 1,065,460
16153
mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1,066,026 to 1,067,472
16154
mRNA_7787: 16155 - Hypothetical Protein, at 1,067,923 to 1,069,410
16155
Group
Condition
mRNA
_7783
mRNA
_7784
mRNA
_7785
mRNA
_7786
mRNA
_7787
16151
16152
16153
16154
16155
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.5
-0.2
+0.1
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
-0.1
-0.4
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.1
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.1
-0.1
-0.5
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.1
-0.0
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.9
+0.3
+0.0
+0.0
+0.1
auxotrophy
Dropout Complete
+0.1
-0.1
+0.1
+0.3
-0.6
auxotrophy
YNB Glucose
-0.0
+0.1
+0.2
+0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
-0.0
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.5
+0.3
+0.1
+0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.0
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.0
+0.3
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
+0.4
+0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.0
+0.1
+0.2
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
+0.3
+0.1
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.3
+0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.0
+0.0
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
+0.1
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
+0.0
+0.1
+0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.0
+0.4
+0.3
+0.6
growth on ypd
YPD
+0.1
+0.3
+0.6
-0.0
+0.5
remove
mRNA_7783
plot
remove
mRNA_7784
plot
remove
mRNA_7785
remove
mRNA_7786
plot
remove
mRNA_7787
plot