Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16152 and 16153 are separated by 426 nucleotides16153 and 16154 are separated by 565 nucleotides16154 and 16155 are separated by 450 nucleotides16155 and 16156 are separated by 390 nucleotides mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,060,507 to 1,063,006 16152 mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,063,433 to 1,065,460 16153 mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1,066,026 to 1,067,472 16154 mRNA_7787: 16155 - Hypothetical Protein, at 1,067,923 to 1,069,410 16155 mRNA_7788: 16156 - Hypothetical Protein, at 1,069,801 to 1,071,312 16156
Group Condition mRNA_7784 mRNA_7785 mRNA_7786 mRNA_7787 mRNA_7788
16152 16153 16154 16155 16156
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.2 +0.1 -0.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.4 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 -0.4 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.5 +0.3 -0.2
auxotrophy Dropout Complete -0.1 +0.1 +0.3 -0.6 -0.2
auxotrophy YNB Glucose +0.1 +0.2 +0.1 -0.4 -0.1
growth on oleic acid YNB Glucose +0.3 +0.1 +0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 +0.0 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.4 +0.3 -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 -0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 -0.1 +0.5 -0.4
growth on oleic acid YNB Oleic Acid +0.3 +0.1 +0.3 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.2 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 -0.1 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 +0.0 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 +0.2 +0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 +0.1 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.0 +0.1 +0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.4 +0.3 +0.6 -0.4
growth on ypd YPD +0.3 +0.6 -0.0 +0.5 -0.3
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