Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16153 and 16154 are separated by 565 nucleotides16154 and 16155 are separated by 450 nucleotides16155 and 16156 are separated by 390 nucleotides16156 and 16157 are separated by 514 nucleotides mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,063,433 to 1,065,460 16153 mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1,066,026 to 1,067,472 16154 mRNA_7787: 16155 - Hypothetical Protein, at 1,067,923 to 1,069,410 16155 mRNA_7788: 16156 - Hypothetical Protein, at 1,069,801 to 1,071,312 16156 mRNA_7789: 16157 - Hypothetical Protein, at 1,071,827 to 1,073,399 16157
Group Condition mRNA_7785 mRNA_7786 mRNA_7787 mRNA_7788 mRNA_7789
16153 16154 16155 16156 16157
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.1 -0.8 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.4 -0.3 +0.0 +0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.2 +0.1 +0.1
auxotrophy Dropout Complete +0.1 +0.3 -0.6 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.5 +0.3 -0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 -0.4 -0.5 +0.0
growth on oleic acid YNB Glucose +0.1 +0.1 -0.1 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 -0.0 -0.3 +0.1
auxotrophy YNB Glucose +0.2 +0.1 -0.4 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 +0.4 -0.3 -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 +0.5 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 +0.1 +0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 +0.0 +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.1 +0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.1 +0.4 +0.0 -0.2
growth on ypd YPD +0.6 -0.0 +0.5 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.3 +0.6 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.7 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 +0.5 +0.1 +0.3
remove
mRNA_7785
plot
remove
mRNA_7786
plot
remove
mRNA_7787
remove
mRNA_7788
plot
remove
mRNA_7789
plot