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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16156 and 16157 are separated by 514 nucleotides
16157 and 16158 are separated by 485 nucleotides
16158 and 16159 are separated by 537 nucleotides
16159 and 16160 are separated by 236 nucleotides
mRNA_7788: 16156 - Hypothetical Protein, at 1,069,801 to 1,071,312
16156
mRNA_7789: 16157 - Hypothetical Protein, at 1,071,827 to 1,073,399
16157
mRNA_7790: 16158 - Hypothetical Protein, at 1,073,885 to 1,074,580
16158
mRNA_7791: 16159 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 1,075,118 to 1,077,656
16159
mRNA_7792: 16160 - Hypothetical Protein, at 1,077,893 to 1,078,494
16160
Group
Condition
mRNA
_7788
mRNA
_7789
mRNA
_7790
mRNA
_7791
mRNA
_7792
16156
16157
16158
16159
16160
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.0
-1.7
+0.1
-1.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.4
+1.1
-0.7
-3.1
growth on ypd
YPD
-0.3
-0.2
-1.5
+0.2
+0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.0
-0.2
-0.4
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.2
+0.7
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
+0.8
-0.2
-1.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
-1.7
-0.8
+1.9
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
+0.3
-0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.0
+0.6
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.1
-0.4
+0.2
+0.6
auxotrophy
YNB Glucose
-0.1
+0.2
-0.4
-0.3
+0.8
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
+0.3
+0.4
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
+0.4
-0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
-0.2
-0.3
+1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.2
+1.0
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.6
+0.0
-0.2
auxotrophy
Dropout Complete
-0.2
+0.0
-0.4
-0.5
+2.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+1.1
-0.4
+0.5
growth on oleic acid
YNB Glucose
-0.3
+0.1
+0.7
+0.5
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
-0.2
+0.4
+2.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.4
-1.0
+0.0
+3.5
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