Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16162 and 16163 are separated by 837 nucleotides
16163 and 16164 are separated by 422 nucleotides
16164 and 16165 are separated by 252 nucleotides
16165 and 16166 are separated by 668 nucleotides
mRNA_7794: 16162 - BLAST rRNA (adenine-N6,N6)-dimethyltransferase [Rhizoctonia..., at 1,082,300 to 1,083,358
16162
mRNA_7795: 16163 - ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006, at 1,084,196 to 1,085,821
16163
mRNA_7796: 16164 - K11322 EPC enhancer of polycomb-like protein, at 1,086,244 to 1,089,209
16164
mRNA_7797: 16165 - Hypothetical Protein, at 1,089,462 to 1,090,208
16165
mRNA_7798: 16166 - Hypothetical Protein, at 1,090,877 to 1,091,572
16166
Group
Condition
mRNA
_7794
mRNA
_7795
mRNA
_7796
mRNA
_7797
mRNA
_7798
16162
16163
16164
16165
16166
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.3
-1.8
+0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
-2.4
+0.4
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.3
-2.1
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
-0.8
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
-0.5
-0.2
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.0
-0.6
+0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
-0.7
+0.0
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.7
-1.5
+0.3
-0.0
growth on ypd
YPD
-0.1
+0.0
-0.4
-0.1
+0.2
auxotrophy
YNB Glucose
-0.3
+0.2
-0.6
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.7
+0.7
-0.0
+0.0
auxotrophy
Dropout Complete
-0.2
-0.1
-0.4
+0.1
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.0
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.0
-0.3
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.1
-0.2
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.6
+1.4
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
+0.9
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.2
+0.5
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.4
+1.5
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
+0.6
+0.2
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.4
+0.5
+0.1
+0.2
remove
mRNA_7794
plot
remove
mRNA_7795
plot
remove
mRNA_7796
remove
mRNA_7797
plot
remove
mRNA_7798
plot