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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16164 and 16165 are separated by 252 nucleotides
16165 and 16166 are separated by 668 nucleotides
16166 and 16167 overlap by 2 nucleotides
16167 and 16168 are separated by 457 nucleotides
mRNA_7796: 16164 - K11322 EPC enhancer of polycomb-like protein, at 1,086,244 to 1,089,209
16164
mRNA_7797: 16165 - Hypothetical Protein, at 1,089,462 to 1,090,208
16165
mRNA_7798: 16166 - Hypothetical Protein, at 1,090,877 to 1,091,572
16166
mRNA_7799: 16167 - KOG1738 Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like, at 1,091,571 to 1,096,193
16167
mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,096,651 to 1,099,129
16168
Group
Condition
mRNA
_7796
mRNA
_7797
mRNA
_7798
mRNA
_7799
mRNA
_7800
16164
16165
16166
16167
16168
facs on lipid accumulation
Sorted High BODIPY Gate
-2.1
+0.1
+0.4
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-1.8
+0.2
+0.0
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-2.4
+0.4
+0.2
+0.3
+0.4
growth on ricinoleic acid
YNB Glucose
-0.7
+0.0
-0.2
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
+0.0
+0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.5
+0.3
-0.0
+0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.6
+0.2
-0.0
+0.0
-0.1
growth on ypd
YPD
-0.4
-0.1
+0.2
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
-0.1
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.2
+0.5
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.2
+0.2
-0.1
+0.1
auxotrophy
YNB Glucose
-0.6
+0.2
+0.4
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
-0.0
+0.0
-0.1
-0.3
auxotrophy
Dropout Complete
-0.4
+0.1
+0.5
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
-0.1
+0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.3
+0.2
+0.5
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.1
+0.2
+0.2
-0.1
growth on oleic acid
YNB Glucose
+0.5
+0.2
+0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.5
-0.0
+0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.4
-0.1
-0.0
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.2
+0.5
+0.4
-0.0
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