Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16168 and 16169 are separated by 826 nucleotides16169 and 16170 are separated by 506 nucleotides16170 and 16171 are separated by 1159 nucleotides16171 and 16172 are separated by 281 nucleotides mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,096,651 to 1,099,129 16168 mRNA_7801: 16169 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,099,956 to 1,102,203 16169 mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1,102,710 to 1,107,641 16170 mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1,108,801 to 1,111,238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1,111,520 to 1,112,833 16172
Group Condition mRNA_7800 mRNA_7801 mRNA_7802 mRNA_7803 mRNA_7804
16168 16169 16170 16171 16172
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -2.3 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 -1.4 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.2 -1.8 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 -2.0 -0.3 +0.1
auxotrophy YNB Glucose -0.1 +0.1 -1.7 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 -1.6 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.4 -0.6 -0.1 -0.6
growth on ricinoleic acid YNB Glucose -0.3 +0.3 -1.5 +0.1 +0.4
auxotrophy Dropout Complete -0.2 +0.2 -1.4 +0.6 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.6 -0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.1 -0.3 -0.3
growth on oleic acid YNB Glucose +0.1 +0.4 -0.8 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 +0.3 -0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.2 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.6 -1.0 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 +0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 +0.3 -0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.3 -0.2 +0.2
growth on ypd YPD -0.0 -0.1 +0.4 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 +0.6 -0.2 +0.3
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