Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16170 and 16171 are separated by 1159 nucleotides16171 and 16172 are separated by 281 nucleotides16172 and 16173 are separated by 203 nucleotides16173 and 16174 are separated by 354 nucleotides mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1,102,710 to 1,107,641 16170 mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1,108,801 to 1,111,238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1,111,520 to 1,112,833 16172 mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1,113,037 to 1,115,028 16173 mRNA_7806: 16174 - Hypothetical Protein, at 1,115,383 to 1,115,856 16174
Group Condition mRNA_7802 mRNA_7803 mRNA_7804 mRNA_7805 mRNA_7806
16170 16171 16172 16173 16174
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 -0.5 -0.1 -0.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -0.4 +0.2 +0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.8 -0.2 -0.2 +0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.3 +0.1 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 -0.6 +0.2 -0.5
auxotrophy YNB Glucose -1.7 +0.2 +0.1 +0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.6 +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -1.6 +0.3 -0.0 +0.2 +0.1
growth on oleic acid YNB Oleic Acid -1.0 +0.3 -0.2 +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 -0.5 +0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.3 +0.2 -0.2
growth on oleic acid YNB Glucose -0.8 +0.1 -0.1 +0.2 +0.0
growth on ricinoleic acid YNB Glucose -1.5 +0.1 +0.4 +0.3 +0.1
auxotrophy Dropout Complete -1.4 +0.6 +0.1 +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.0 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 +0.1 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.5 +0.2 +0.2 -0.1
growth on ypd YPD +0.4 -0.2 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.2 +0.2 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.2 +0.3 -0.1 +0.5
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