Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16174 and 16175 are separated by 452 nucleotides16175 and 16176 are separated by 212 nucleotides16176 and 16177 are separated by 382 nucleotides16177 and 16178 are separated by 938 nucleotides mRNA_7806: 16174 - Hypothetical Protein, at 1,115,383 to 1,115,856 16174 mRNA_7807: 16175 - K01304 pcp pyroglutamyl-peptidase, at 1,116,309 to 1,117,210 16175 mRNA_7808: 16176 - K20183 VPS39, VAM6 Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39, at 1,117,423 to 1,121,551 16176 mRNA_7809: 16177 - Hypothetical Protein, at 1,121,934 to 1,122,810 16177 mRNA_7810: 16178 - K02358 tuf, TUFM elongation factor Tu, at 1,123,749 to 1,125,478 16178
Group Condition mRNA_7806 mRNA_7807 mRNA_7808 mRNA_7809 mRNA_7810
16174 16175 16176 16177 16178
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.1 -1.6 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -1.1 -0.1 N.D.
auxotrophy YNB Glucose -0.2 -0.2 -0.7 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 -1.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.7 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -0.8 -0.1 N.D.
growth on oleic acid YNB Glucose +0.0 +0.0 -0.5 +0.0 N.D.
auxotrophy Dropout Complete +0.1 +0.1 -0.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 -0.5 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -0.5 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.4 -0.3 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 +0.7 +0.0 N.D.
growth on ypd YPD -0.1 -0.1 +0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.3 -0.3 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.1 +0.7 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -1.4 +1.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.3 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.3 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 +0.5 +0.3 N.D.
remove
mRNA_7806
plot
remove
mRNA_7807
plot
remove
mRNA_7808
remove
mRNA_7809
plot
remove
mRNA_7810
plot