Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16187 and 16188 are separated by 250 nucleotides
16188 and 16189 are separated by 389 nucleotides
16189 and 16190 are separated by 496 nucleotides
16190 and 16191 are separated by 1784 nucleotides
mRNA_7819: 16187 - K15015 SLC32A, VGAT solute carrier family 32 (vesicular inhibitory amino acid transporter), at 1,142,212 to 1,144,699
16187
mRNA_7820: 16188 - Hypothetical Protein, at 1,144,950 to 1,145,793
16188
mRNA_7821: 16189 - Hypothetical Protein, at 1,146,183 to 1,147,264
16189
mRNA_7822: 16190 - Hypothetical Protein, at 1,147,761 to 1,148,329
16190
mRNA_7823: 16191 - K03011 RPB3, POLR2C DNA-directed RNA polymerase II subunit RPB3, at 1,150,114 to 1,151,854
16191
Group
Condition
mRNA
_7819
mRNA
_7820
mRNA
_7821
mRNA
_7822
mRNA
_7823
16187
16188
16189
16190
16191
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.1
-3.0
-1.0
growth on ypd
YPD
-0.1
+0.2
+0.2
+0.6
-2.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
+0.0
-0.5
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.0
-0.1
-1.2
+1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
+0.1
-0.8
+0.5
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
+0.0
+0.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.2
-0.7
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.2
-0.1
-0.4
+1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.3
-0.2
-0.7
+1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
-0.2
+1.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.2
-0.1
+0.2
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.3
-0.2
-0.2
+1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.4
-0.2
+0.0
+0.8
auxotrophy
Dropout Complete
-0.2
+0.1
-0.2
-0.2
+1.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.2
+0.2
-1.0
+1.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.1
-0.2
+1.7
growth on oleic acid
YNB Oleic Acid
-0.3
+0.3
+0.3
-0.2
+1.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
+0.1
+0.8
+1.0
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.4
-0.1
+1.8
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.4
-0.0
+0.5
+1.8
auxotrophy
YNB Glucose
-0.1
+0.6
-0.1
+0.2
+1.7
remove
mRNA_7819
plot
remove
mRNA_7820
plot
remove
mRNA_7821
remove
mRNA_7822
plot
remove
mRNA_7823
plot