Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16192 and 16193 are separated by 148 nucleotides
16193 and 16194 are separated by 261 nucleotides
16194 and 16195 are separated by 664 nucleotides
16195 and 16196 are separated by 232 nucleotides
mRNA_7824: 16192 - K17981 MTFP1, MTP18 mitochondrial fission process protein 1, at 1,152,339 to 1,153,268
16192
mRNA_7825: 16193 - K00759 APRT, apt adenine phosphoribosyltransferase, at 1,153,417 to 1,154,602
16193
mRNA_7826: 16194 - KOG2533 Permease of the major facilitator superfamily, at 1,154,864 to 1,157,345
16194
mRNA_7827: 16195 - KOG4680 Uncharacterized conserved protein, contains ML domain, at 1,158,010 to 1,158,995
16195
mRNA_7828: 16196 - K01940 argG, ASS1 argininosuccinate synthase, at 1,159,228 to 1,161,010
16196
Group
Condition
mRNA
_7824
mRNA
_7825
mRNA
_7826
mRNA
_7827
mRNA
_7828
16192
16193
16194
16195
16196
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.1
-0.3
-1.5
-4.2
auxotrophy
YNB Glucose
-0.3
+0.0
-0.5
-0.1
-4.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.4
-0.3
-0.8
-3.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.2
-2.2
-2.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.5
-0.4
-1.2
-3.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.6
+0.2
-3.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.2
-0.3
-0.2
-3.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.4
-0.1
-1.6
-2.6
growth on oleic acid
YNB Glucose
+0.5
-0.1
+0.1
-0.3
-4.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
-0.1
+0.0
-3.6
growth on oleic acid
YNB Oleic Acid
+0.0
-0.2
-0.2
-0.1
-3.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.3
-0.2
-0.1
-3.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+0.1
+0.1
-3.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
-0.2
-0.7
-1.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.6
+0.5
-0.5
auxotrophy
Dropout Complete
-0.3
-0.0
-0.3
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
+0.0
-0.2
+0.3
growth on ypd
YPD
-0.1
+0.3
-0.4
-0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
-0.0
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.0
-0.1
+0.4
remove
mRNA_7824
plot
remove
mRNA_7825
plot
remove
mRNA_7826
remove
mRNA_7827
plot
remove
mRNA_7828
plot