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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16193 and 16194 are separated by 261 nucleotides
16194 and 16195 are separated by 664 nucleotides
16195 and 16196 are separated by 232 nucleotides
16196 and 16197 are separated by 363 nucleotides
mRNA_7825: 16193 - K00759 APRT, apt adenine phosphoribosyltransferase, at 1,153,417 to 1,154,602
16193
mRNA_7826: 16194 - KOG2533 Permease of the major facilitator superfamily, at 1,154,864 to 1,157,345
16194
mRNA_7827: 16195 - KOG4680 Uncharacterized conserved protein, contains ML domain, at 1,158,010 to 1,158,995
16195
mRNA_7828: 16196 - K01940 argG, ASS1 argininosuccinate synthase, at 1,159,228 to 1,161,010
16196
mRNA_7829: 16197 - K06126 COQ6 ubiquinone biosynthesis monooxygenase Coq6, at 1,161,374 to 1,163,565
16197
Group
Condition
mRNA
_7825
mRNA
_7826
mRNA
_7827
mRNA
_7828
mRNA
_7829
16193
16194
16195
16196
16197
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-2.2
-2.3
-1.9
auxotrophy
YNB Glucose
+0.0
-0.5
-0.1
-4.3
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
-0.2
-3.8
-1.6
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.3
-4.0
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
-1.5
-4.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.6
+0.2
-3.9
-1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
+0.0
-3.6
-1.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.4
-1.2
-3.0
+0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.1
-3.2
-0.9
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.1
-3.9
-1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.3
-0.8
-3.6
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.1
-1.6
-2.6
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
-0.7
-1.7
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.1
-3.3
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.6
+0.5
-0.5
-1.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
-0.1
-0.2
-1.1
auxotrophy
Dropout Complete
-0.0
-0.3
+0.2
-0.1
-1.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
+0.1
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
-0.2
+0.3
+0.1
growth on ypd
YPD
+0.3
-0.4
-0.4
+0.3
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.1
+0.4
+0.3
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