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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16195 and 16196 are separated by 232 nucleotides
16196 and 16197 are separated by 363 nucleotides
16197 and 16198 are separated by 958 nucleotides
16198 and 16199 are separated by 372 nucleotides
mRNA_7827: 16195 - KOG4680 Uncharacterized conserved protein, contains ML domain, at 1,158,010 to 1,158,995
16195
mRNA_7828: 16196 - K01940 argG, ASS1 argininosuccinate synthase, at 1,159,228 to 1,161,010
16196
mRNA_7829: 16197 - K06126 COQ6 ubiquinone biosynthesis monooxygenase Coq6, at 1,161,374 to 1,163,565
16197
mRNA_7830: 16198 - Hypothetical Protein, at 1,164,524 to 1,165,220
16198
mRNA_7831: 16199 - Hypothetical Protein, at 1,165,593 to 1,166,209
16199
Group
Condition
mRNA
_7827
mRNA
_7828
mRNA
_7829
mRNA
_7830
mRNA
_7831
16195
16196
16197
16198
16199
facs on lipid accumulation
Sorted High BODIPY Gate
-2.2
-2.3
-1.9
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-4.2
+0.1
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-3.6
-1.8
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
-4.3
-1.1
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-3.8
-1.6
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.3
-4.0
-1.7
-0.0
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-3.9
-1.2
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-3.9
-1.3
+0.0
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-1.6
-2.6
-0.3
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.2
-3.0
+0.2
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-3.2
-0.9
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
-3.6
+0.6
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-3.3
+0.3
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-1.7
-0.9
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
-0.5
-1.3
-0.1
+0.3
auxotrophy
Dropout Complete
+0.2
-0.1
-1.1
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-1.1
+0.5
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.2
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.3
+0.1
+0.1
+0.1
growth on ypd
YPD
-0.4
+0.3
+0.5
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
+0.3
+0.1
+0.0
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