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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16205 and 16206 are separated by 307 nucleotides
16206 and 16207 are separated by 375 nucleotides
16207 and 16208 are separated by 526 nucleotides
16208 and 16209 are separated by 571 nucleotides
mRNA_7837: 16205 - Hypothetical Protein, at 1,178,519 to 1,178,828
16205
mRNA_7838: 16206 - K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase, at 1,179,136 to 1,180,563
16206
mRNA_7839: 16207 - Hypothetical Protein, at 1,180,939 to 1,182,264
16207
mRNA_7840: 16208 - K00620 argJ glutamate N-acetyltransferase / amino-acid N-acetyltransferase, at 1,182,791 to 1,184,398
16208
mRNA_7841: 16209 - K04728 ATM, TEL1 ataxia telangiectasia mutated family protein, at 1,184,970 to 1,194,668
16209
Group
Condition
mRNA
_7837
mRNA
_7838
mRNA
_7839
mRNA
_7840
mRNA
_7841
16205
16206
16207
16208
16209
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.2
-4.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.0
-3.9
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.2
-3.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.5
+0.1
-3.6
-0.4
auxotrophy
YNB Glucose
N.D.
-0.1
+0.3
-3.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
+0.2
-2.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.2
-0.0
-1.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.1
-1.7
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.0
-1.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.2
-1.7
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.5
+0.3
-1.9
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
+0.1
-1.2
-0.3
growth on ypd
YPD
N.D.
-0.0
-0.2
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.0
-0.7
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
+0.1
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.5
+0.0
-0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.1
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
-0.1
+0.1
+0.1
auxotrophy
Dropout Complete
N.D.
+0.1
+0.2
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.2
+0.7
-0.2
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