Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16206 and 16207 are separated by 375 nucleotides
16207 and 16208 are separated by 526 nucleotides
16208 and 16209 are separated by 571 nucleotides
16209 and 16210 are separated by 394 nucleotides
mRNA_7838: 16206 - K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase, at 1,179,136 to 1,180,563
16206
mRNA_7839: 16207 - Hypothetical Protein, at 1,180,939 to 1,182,264
16207
mRNA_7840: 16208 - K00620 argJ glutamate N-acetyltransferase / amino-acid N-acetyltransferase, at 1,182,791 to 1,184,398
16208
mRNA_7841: 16209 - K04728 ATM, TEL1 ataxia telangiectasia mutated family protein, at 1,184,970 to 1,194,668
16209
mRNA_7842: 16210 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SMART-ankyrin repeats-SM00248,SUPERFAMILY--SSF48403, at 1,195,063 to 1,195,629
16210
Group
Condition
mRNA
_7838
mRNA
_7839
mRNA
_7840
mRNA
_7841
mRNA
_7842
16206
16207
16208
16209
16210
growth on oleic acid
YNB Glucose
-0.0
+0.2
-4.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.1
-3.6
-0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
-3.4
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.0
+0.0
-3.9
-0.1
+0.9
auxotrophy
YNB Glucose
-0.1
+0.3
-3.1
-0.2
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
-2.4
-0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
-1.7
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
-1.2
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
-1.4
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.3
-1.9
-0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
-1.1
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.2
-1.7
-0.4
+0.4
growth on ypd
YPD
-0.0
-0.2
-0.2
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
+0.2
+0.0
-0.7
-0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.0
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.0
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
+0.1
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
-0.5
+0.1
+0.4
auxotrophy
Dropout Complete
+0.1
+0.2
+0.3
-0.2
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.2
+0.7
-0.2
+0.3
remove
mRNA_7838
plot
remove
mRNA_7839
plot
remove
mRNA_7840
remove
mRNA_7841
plot
remove
mRNA_7842
plot