Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16212 and 16213 are separated by 1555 nucleotides
16213 and 16214 are separated by 266 nucleotides
16214 and 16215 are separated by 1082 nucleotides
16215 and 16216 are separated by 606 nucleotides
mRNA_7844: 16212 - K02966 RP-S19e, RPS19 small subunit ribosomal protein S19e, at 1,196,935 to 1,198,284
16212
mRNA_7845: 16213 - K14154 THI6 thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase, at 1,199,840 to 1,202,125
16213
mRNA_7846: 16214 - K04460 PPP5C serine/threonine-protein phosphatase 5, at 1,202,392 to 1,204,902
16214
mRNA_7847: 16215 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1,205,985 to 1,207,828
16215
mRNA_7848: 16216 - BLAST LYR MOTIF-CONTAINING PROTEIN 7 [Ceraceosorus bombacis], at 1,208,435 to 1,209,073
16216
Group
Condition
mRNA
_7844
mRNA
_7845
mRNA
_7846
mRNA
_7847
mRNA
_7848
16212
16213
16214
16215
16216
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
-1.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
-0.4
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.5
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.2
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.4
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.0
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-0.5
+0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.3
+0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.0
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.0
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.2
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
+0.0
+0.3
N.D.
auxotrophy
YNB Glucose
N.D.
+0.1
+0.0
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.2
+0.4
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.0
+0.6
N.D.
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
+0.5
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.1
+0.5
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
-0.1
+0.7
N.D.
growth on ypd
YPD
N.D.
+0.1
+0.2
+0.7
N.D.
remove
mRNA_7844
plot
remove
mRNA_7845
plot
remove
mRNA_7846
remove
mRNA_7847
plot
remove
mRNA_7848
plot