Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16214 and 16215 are separated by 1082 nucleotides16215 and 16216 are separated by 606 nucleotides16216 and 16217 are separated by 4639 nucleotides16217 and 16218 are separated by 990 nucleotides mRNA_7846: 16214 - K04460 PPP5C serine/threonine-protein phosphatase 5, at 1,202,392 to 1,204,902 16214 mRNA_7847: 16215 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1,205,985 to 1,207,828 16215 mRNA_7848: 16216 - BLAST LYR MOTIF-CONTAINING PROTEIN 7 [Ceraceosorus bombacis], at 1,208,435 to 1,209,073 16216 mRNA_7849: 16217 - KOG1529 Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase, at 1,213,713 to 1,217,281 16217 mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1,218,272 to 1,218,817 16218
Group Condition mRNA_7846 mRNA_7847 mRNA_7848 mRNA_7849 mRNA_7850
16214 16215 16216 16217 16218
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -1.0 N.D. -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 N.D. -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.2 N.D. -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.2 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.0 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.6 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.3 N.D. -0.2 N.D.
auxotrophy YNB Glucose +0.0 +0.3 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.6 N.D. -0.0 N.D.
auxotrophy Dropout Complete -0.2 +0.5 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.5 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.0 +0.6 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.7 N.D. -0.1 N.D.
growth on ypd YPD +0.2 +0.7 N.D. -0.1 N.D.
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