Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16215 and 16216 are separated by 606 nucleotides16216 and 16217 are separated by 4639 nucleotides16217 and 16218 are separated by 990 nucleotides16218 and 16219 are separated by 4150 nucleotides mRNA_7847: 16215 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 1,205,985 to 1,207,828 16215 mRNA_7848: 16216 - BLAST LYR MOTIF-CONTAINING PROTEIN 7 [Ceraceosorus bombacis], at 1,208,435 to 1,209,073 16216 mRNA_7849: 16217 - KOG1529 Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase, at 1,213,713 to 1,217,281 16217 mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1,218,272 to 1,218,817 16218 mRNA_7851: 16219 - KOG0142 Isopentenyl pyrophosphate-dimethylallyl pyrophosphate isomerase, at 1,222,968 to 1,223,602 16219
Group Condition mRNA_7847 mRNA_7848 mRNA_7849 mRNA_7850 mRNA_7851
16215 16216 16217 16218 16219
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 N.D. -0.3 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.2 N.D. -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.1 N.D. -1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.3 N.D. -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.4 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.3 N.D. -0.6
auxotrophy YNB Glucose +0.3 N.D. -0.1 N.D. -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. -0.0 N.D. -1.1
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.4 N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.1 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.2 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.0 N.D. -0.1
auxotrophy Dropout Complete +0.5 N.D. -0.1 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. +0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.5 N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.7 N.D. -0.1 N.D. -0.4
growth on oleic acid YNB Glucose +0.6 N.D. -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. -0.2 N.D. +0.3
growth on ypd YPD +0.7 N.D. -0.1 N.D. +0.2
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