Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16218 and 16219 are separated by 4150 nucleotides16219 and 16220 are separated by 2808 nucleotides16220 and 16221 are separated by 303 nucleotides16221 and 16222 are separated by 486 nucleotides mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1,218,272 to 1,218,817 16218 mRNA_7851: 16219 - KOG0142 Isopentenyl pyrophosphate-dimethylallyl pyrophosphate isomerase, at 1,222,968 to 1,223,602 16219 mRNA_7852: 16220 - Hypothetical Protein, at 1,226,411 to 1,226,632 16220 mRNA_7853: 16221 - Hypothetical Protein, at 1,226,936 to 1,227,400 16221 mRNA_7854: 16222 - HMMPfam-Fungal protein of unknown function (DUF2015)-PF09435, at 1,227,887 to 1,228,457 16222
Group Condition mRNA_7850 mRNA_7851 mRNA_7852 mRNA_7853 mRNA_7854
16218 16219 16220 16221 16222
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -4.1 -0.1 -1.7
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -3.2 -0.3 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.1 -0.9 +0.1 -1.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.5 -0.1 -1.9
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -1.2 -0.2 -0.9
auxotrophy YNB Glucose 75mM Arginine N.D. -0.6 -0.8 -0.3 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.9 -1.4 -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.0 -0.2 -0.1 -0.8
auxotrophy YNB Glucose N.D. -0.8 -1.0 -0.1 -0.2
auxotrophy Dropout Complete N.D. -0.4 -1.5 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.1 -0.4 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.7 -0.2 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.4 -0.3 -0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.0 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 +0.7 +0.4 -0.7
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.4 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.3 +0.4 +0.2
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.4 -0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +1.5 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.5 +0.4 -0.2
growth on ypd YPD N.D. +0.2 +0.9 -0.0 -0.1
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