Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16219 and 16220 are separated by 2808 nucleotides
16220 and 16221 are separated by 303 nucleotides
16221 and 16222 are separated by 486 nucleotides
16222 and 16223 are separated by 397 nucleotides
mRNA_7851: 16219 - KOG0142 Isopentenyl pyrophosphate-dimethylallyl pyrophosphate isomerase, at 1,222,968 to 1,223,602
16219
mRNA_7852: 16220 - Hypothetical Protein, at 1,226,411 to 1,226,632
16220
mRNA_7853: 16221 - Hypothetical Protein, at 1,226,936 to 1,227,400
16221
mRNA_7854: 16222 - HMMPfam-Fungal protein of unknown function (DUF2015)-PF09435, at 1,227,887 to 1,228,457
16222
mRNA_7855: 16223 - K15443 TRM82, WDR4 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82, at 1,228,855 to 1,230,795
16223
Group
Condition
mRNA
_7851
mRNA
_7852
mRNA
_7853
mRNA
_7854
mRNA
_7855
16219
16220
16221
16222
16223
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-4.1
-0.1
-1.7
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.9
+0.1
-1.4
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.8
-0.3
-0.6
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.5
-0.1
-1.9
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
-3.2
-0.3
-0.5
+0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.1
-0.4
+0.4
-0.3
-1.7
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.2
-0.1
-0.8
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-1.2
-0.2
-0.9
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-1.4
-0.1
+0.3
-0.3
auxotrophy
Dropout Complete
-0.4
-1.5
-0.1
+0.1
-0.2
auxotrophy
YNB Glucose
-0.8
-1.0
-0.1
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.3
+0.4
+0.2
-1.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.7
+0.4
-0.7
-1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
-0.3
-0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
+0.4
-0.1
+0.4
-1.5
growth on oleic acid
YNB Glucose
-0.2
-0.0
-0.1
-0.4
+0.1
growth on ypd
YPD
+0.2
+0.9
-0.0
-0.1
-1.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.5
+0.4
-0.2
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.7
-0.2
-0.1
+0.0
+1.4
growth on ricinoleic acid
YNB Glucose
-0.3
+0.4
-0.2
+0.2
+0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+1.5
-0.2
-0.1
+0.6
remove
mRNA_7851
plot
remove
mRNA_7852
plot
remove
mRNA_7853
remove
mRNA_7854
plot
remove
mRNA_7855
plot