Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16224 and 16225 are separated by 699 nucleotides16225 and 16226 are separated by 2090 nucleotides16226 and 16227 are separated by 202 nucleotides16227 and 16228 are separated by 442 nucleotides mRNA_7856: 16224 - K17783 ERV1, GFER, ALR mitochondrial FAD-linked sulfhydryl oxidase, at 1,230,890 to 1,231,576 16224 mRNA_7857: 16225 - K00211 TYR1 prephenate dehydrogenase (NADP+), at 1,232,276 to 1,233,897 16225 mRNA_7858: 16226 - K11673 ACTR8, ARP8, INO80N actin-related protein 8, at 1,235,988 to 1,238,958 16226 mRNA_7859: 16227 - Hypothetical Protein, at 1,239,161 to 1,241,466 16227 mRNA_7860: 16228 - HMMPfam-Diacylglycerol kinase catalytic domain-PF00781,ProSiteProfiles-DAG-kinase catalytic (DAGKc) domain profile.-PS50146,SUPERFAMILY--SSF111331, at 1,241,909 to 1,243,568 16228
Group Condition mRNA_7856 mRNA_7857 mRNA_7858 mRNA_7859 mRNA_7860
16224 16225 16226 16227 16228
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -3.1 -0.4 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.8 -0.4 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.9 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.8 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.4 -0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.5 -0.4 +0.2
auxotrophy YNB Glucose N.D. N.D. -0.5 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.6 -0.1 +0.1
auxotrophy Dropout Complete N.D. N.D. -0.2 -0.4 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.4 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 -0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.5 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.3 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.1 +0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.4 -0.0 -0.0
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.8 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.0 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.7 -0.0 +0.3
growth on oleic acid YNB Glucose N.D. N.D. +1.2 -0.2 +0.0
growth on ypd YPD N.D. N.D. +2.0 +0.2 -0.2
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