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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16226 and 16227 are separated by 202 nucleotides
16227 and 16228 are separated by 442 nucleotides
16228 and 16229 are separated by 320 nucleotides
16229 and 16230 are separated by 356 nucleotides
mRNA_7858: 16226 - K11673 ACTR8, ARP8, INO80N actin-related protein 8, at 1,235,988 to 1,238,958
16226
mRNA_7859: 16227 - Hypothetical Protein, at 1,239,161 to 1,241,466
16227
mRNA_7860: 16228 - HMMPfam-Diacylglycerol kinase catalytic domain-PF00781,ProSiteProfiles-DAG-kinase catalytic (DAGKc) domain profile.-PS50146,SUPERFAMILY--SSF111331, at 1,241,909 to 1,243,568
16228
mRNA_7861: 16229 - BLAST Transcriptional activator Myb [Leucoagaricus sp. SymC..., at 1,243,889 to 1,246,571
16229
mRNA_7862: 16230 - Hypothetical Protein, at 1,246,928 to 1,249,617
16230
Group
Condition
mRNA
_7858
mRNA
_7859
mRNA
_7860
mRNA
_7861
mRNA
_7862
16226
16227
16228
16229
16230
ypd buoyancy
40 hrs No Buoyancy Separation
-3.1
-0.4
+0.0
+0.0
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.9
-0.1
-0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
-0.1
-0.6
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.1
+0.1
-0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.8
-0.4
+0.0
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.3
+0.0
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.1
-0.2
-0.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.7
+0.2
-0.5
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.4
-0.0
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.1
+0.1
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.4
+0.2
+0.1
+0.6
auxotrophy
YNB Glucose
-0.5
-0.4
+0.2
+0.2
+0.4
auxotrophy
Dropout Complete
-0.2
-0.4
+0.4
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
+0.2
+0.0
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.0
-0.0
-0.0
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
-0.0
+0.5
+0.3
growth on oleic acid
YNB Oleic Acid
+0.8
-0.3
+0.1
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
-0.1
+0.0
+0.3
+0.2
growth on oleic acid
YNB Glucose
+1.2
-0.2
+0.0
-0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.0
+0.3
+0.4
+0.7
growth on ypd
YPD
+2.0
+0.2
-0.2
+0.3
-0.1
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