Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16228 and 16229 are separated by 320 nucleotides16229 and 16230 are separated by 356 nucleotides16230 and 16231 are separated by 113 nucleotides16231 and 16232 are separated by 4860 nucleotides mRNA_7860: 16228 - HMMPfam-Diacylglycerol kinase catalytic domain-PF00781,ProSiteProfiles-DAG-kinase catalytic (DAGKc) domain profile.-PS50146,SUPERFAMILY--SSF111331, at 1,241,909 to 1,243,568 16228 mRNA_7861: 16229 - BLAST Transcriptional activator Myb [Leucoagaricus sp. SymC..., at 1,243,889 to 1,246,571 16229 mRNA_7862: 16230 - Hypothetical Protein, at 1,246,928 to 1,249,617 16230 mRNA_7863: 16231 - K11407 HDAC6 histone deacetylase 6, at 1,249,731 to 1,253,390 16231 mRNA_7864: 16232 - PRINTS-Proline rich extensin signature-PR01217, at 1,258,251 to 1,258,922 16232
Group Condition mRNA_7860 mRNA_7861 mRNA_7862 mRNA_7863 mRNA_7864
16228 16229 16230 16231 16232
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6 -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.0 -0.7 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.5 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.5 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.5 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.0 N.D. N.D.
growth on ypd YPD -0.2 +0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 +0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.3 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.0 -0.0 +0.5 N.D. N.D.
auxotrophy Dropout Complete +0.4 -0.1 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.5 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 +0.6 N.D. N.D.
auxotrophy YNB Glucose +0.2 +0.2 +0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.6 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.4 +0.7 N.D. N.D.
remove
mRNA_7860
plot
remove
mRNA_7861
plot
remove
mRNA_7862
remove
mRNA_7863
plot
remove
mRNA_7864
plot