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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16232 and 16233 are separated by 209 nucleotides
16233 and 16234 are separated by 483 nucleotides
16234 and 16235 are separated by 528 nucleotides
16235 and 16236 are separated by 92 nucleotides
mRNA_7864: 16232 - PRINTS-Proline rich extensin signature-PR01217, at 1,258,251 to 1,258,922
16232
mRNA_7865: 16233 - Hypothetical Protein, at 1,259,132 to 1,259,731
16233
mRNA_7866: 16234 - Hypothetical Protein, at 1,260,215 to 1,261,528
16234
mRNA_7867: 16235 - Hypothetical Protein, at 1,262,057 to 1,262,662
16235
mRNA_7868: 16236 - Hypothetical Protein, at 1,262,755 to 1,264,857
16236
Group
Condition
mRNA
_7864
mRNA
_7865
mRNA
_7866
mRNA
_7867
mRNA
_7868
16232
16233
16234
16235
16236
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-1.3
+0.0
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-1.6
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.9
+0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.0
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.4
+0.1
-0.4
growth on ypd
YPD
N.D.
N.D.
+0.0
+0.0
-0.6
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.5
+0.0
-1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.3
-0.0
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
-0.3
-0.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.3
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.4
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.3
-0.3
-0.1
auxotrophy
Dropout Complete
N.D.
N.D.
+0.2
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.5
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.6
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+1.0
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.7
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
+0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.4
-0.1
+0.4
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