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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16233 and 16234 are separated by 483 nucleotides
16234 and 16235 are separated by 528 nucleotides
16235 and 16236 are separated by 92 nucleotides
16236 and 16237 are separated by 188 nucleotides
mRNA_7865: 16233 - Hypothetical Protein, at 1,259,132 to 1,259,731
16233
mRNA_7866: 16234 - Hypothetical Protein, at 1,260,215 to 1,261,528
16234
mRNA_7867: 16235 - Hypothetical Protein, at 1,262,057 to 1,262,662
16235
mRNA_7868: 16236 - Hypothetical Protein, at 1,262,755 to 1,264,857
16236
mRNA_7869: 16237 - KOG4366 Predicted thioesterase, at 1,265,046 to 1,266,017
16237
Group
Condition
mRNA
_7865
mRNA
_7866
mRNA
_7867
mRNA
_7868
mRNA
_7869
16233
16234
16235
16236
16237
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.3
+0.0
-0.5
-2.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.9
+0.2
-0.4
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.0
-0.1
-1.7
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
-0.3
-0.4
-1.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.5
-0.2
-0.2
-1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
+0.1
-0.4
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
+0.0
-1.1
-0.3
growth on ypd
YPD
N.D.
+0.0
+0.0
-0.6
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.6
+0.1
-0.1
+1.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
-0.2
-0.3
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.2
-0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.4
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+1.0
-0.2
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.7
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.6
-0.0
-0.2
+0.1
auxotrophy
YNB Glucose
N.D.
-0.3
-0.0
-0.1
+1.0
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
-0.1
+0.9
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
+0.2
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.4
-0.1
-0.5
+1.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
-0.3
-0.1
+1.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
-0.1
+0.4
+0.5
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