Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16237 and 16238 are separated by 384 nucleotides16238 and 16239 are separated by 504 nucleotides16239 and 16240 are separated by 275 nucleotides16240 and 16241 are separated by 163 nucleotides mRNA_7869: 16237 - KOG4366 Predicted thioesterase, at 1,265,046 to 1,266,017 16237 mRNA_7870: 16238 - HMMPfam-Putative S-adenosyl-L-methionine-dependent methyltransferase-PF02636,SUPERFAMILY--SSF53335, at 1,266,402 to 1,268,243 16238 mRNA_7871: 16239 - HMMPfam-NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-PF10785,HMMPfam-C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit-PF12853, at 1,268,748 to 1,269,594 16239 mRNA_7872: 16240 - K11411 SIRT1, SIR2L1 NAD-dependent deacetylase sirtuin 1, at 1,269,870 to 1,272,263 16240 mRNA_7873: 16241 - K10258 TER, TSC13, CER10 very-long-chain enoyl-CoA reductase, at 1,272,427 to 1,274,098 16241
Group Condition mRNA_7869 mRNA_7870 mRNA_7871 mRNA_7872 mRNA_7873
16237 16238 16239 16240 16241
ypd buoyancy 40 hrs No Buoyancy Separation -2.6 N.D. N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.7 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.3 N.D. N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -1.3 N.D. N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. N.D. +0.1 N.D.
growth on ypd YPD -0.1 N.D. N.D. -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. N.D. +0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. +0.4 N.D.
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. N.D. +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. N.D. -0.0 N.D.
auxotrophy Dropout Complete +0.9 N.D. N.D. +0.3 N.D.
auxotrophy YNB Glucose +1.0 N.D. N.D. +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.1 N.D. N.D. +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +1.1 N.D. N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.2 N.D. N.D. +0.3 N.D.
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