Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16240 and 16241 are separated by 163 nucleotides16241 and 16242 are separated by 147 nucleotides16242 and 16243 are separated by 438 nucleotides16243 and 16244 are separated by 123 nucleotides mRNA_7872: 16240 - K11411 SIRT1, SIR2L1 NAD-dependent deacetylase sirtuin 1, at 1,269,870 to 1,272,263 16240 mRNA_7873: 16241 - K10258 TER, TSC13, CER10 very-long-chain enoyl-CoA reductase, at 1,272,427 to 1,274,098 16241 mRNA_7874: 16242 - K02202 CDK7 cyclin-dependent kinase 7, at 1,274,246 to 1,275,705 16242 mRNA_7875: 16243 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1,276,144 to 1,278,283 16243 mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1,278,407 to 1,280,463 16244
Group Condition mRNA_7872 mRNA_7873 mRNA_7874 mRNA_7875 mRNA_7876
16240 16241 16242 16243 16244
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -1.3 +0.1 -1.4
growth on ypd YPD -0.1 N.D. -0.6 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. +0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.4 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.1 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.6 -0.0 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. -0.1 -0.1 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. -0.2 -0.1 +0.2
auxotrophy YNB Glucose +0.2 N.D. -0.4 -0.2 +0.6
auxotrophy Dropout Complete +0.3 N.D. -0.4 -0.2 +0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.5 -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.6 N.D. -0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.2 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.4 -0.0 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.2 -0.2 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.4 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.4 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.5 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.9 +0.1 +0.1
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