Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16242 and 16243 are separated by 438 nucleotides16243 and 16244 are separated by 123 nucleotides16244 and 16245 are separated by 308 nucleotides16245 and 16246 are separated by 221 nucleotides mRNA_7874: 16242 - K02202 CDK7 cyclin-dependent kinase 7, at 1,274,246 to 1,275,705 16242 mRNA_7875: 16243 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1,276,144 to 1,278,283 16243 mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1,278,407 to 1,280,463 16244 mRNA_7877: 16245 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1,280,772 to 1,282,226 16245 mRNA_7878: 16246 - K14400 PCF11 pre-mRNA cleavage complex 2 protein Pcf11, at 1,282,448 to 1,285,814 16246
Group Condition mRNA_7874 mRNA_7875 mRNA_7876 mRNA_7877 mRNA_7878
16242 16243 16244 16245 16246
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.1 -1.4 -1.1 N.D.
growth on ypd YPD -0.6 -0.2 -0.3 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.1 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 -0.2 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose -0.2 -0.1 +0.2 -0.1 N.D.
auxotrophy YNB Glucose -0.4 -0.2 +0.6 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 +0.3 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.0 +0.5 +0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.2 +0.6 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.2 +0.1 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 +0.6 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 +0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.2 +0.7 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.2 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.3 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.9 +0.1 +0.1 -0.1 N.D.
remove
mRNA_7874
plot
remove
mRNA_7875
plot
remove
mRNA_7876
remove
mRNA_7877
plot
remove
mRNA_7878
plot