Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16246 and 16247 are separated by 5 nucleotides
16247 and 16248 are separated by 116 nucleotides
16248 and 16249 are separated by 783 nucleotides
16249 and 16250 are separated by 1432 nucleotides
mRNA_7878: 16246 - K14400 PCF11 pre-mRNA cleavage complex 2 protein Pcf11, at 1,282,448 to 1,285,814
16246
mRNA_7879: 16247 - Hypothetical Protein, at 1,285,820 to 1,286,086
16247
mRNA_7880: 16248 - K02940 RP-L9e, RPL9 large subunit ribosomal protein L9e, at 1,286,203 to 1,287,208
16248
mRNA_7881: 16249 - Hypothetical Protein, at 1,287,992 to 1,288,558
16249
mRNA_7882: 16250 - HMMPfam-Protein of unknown function (DUF4243)-PF14027, at 1,289,991 to 1,293,240
16250
Group
Condition
mRNA
_7878
mRNA
_7879
mRNA
_7880
mRNA
_7881
mRNA
_7882
16246
16247
16248
16249
16250
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.8
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
-0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
+0.1
-0.6
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
-0.0
-0.3
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.1
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
+0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.2
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
+0.5
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
+0.6
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+0.7
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
+0.7
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
+0.9
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.8
+0.3
growth on ypd
YPD
N.D.
N.D.
N.D.
+1.4
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+1.6
+0.1
remove
mRNA_7878
plot
remove
mRNA_7879
plot
remove
mRNA_7880
remove
mRNA_7881
plot
remove
mRNA_7882
plot