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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16255 and 16256 are separated by 206 nucleotides
16256 and 16257 are separated by 467 nucleotides
16257 and 16258 are separated by 734 nucleotides
16258 and 16259 are separated by 259 nucleotides
mRNA_7887: 16255 - HMMPfam-Uncharacterized conserved protein (DUF2183)-PF09949, at 1,302,822 to 1,306,124
16255
mRNA_7888: 16256 - K12274 SEC72 translocation protein SEC72, at 1,306,331 to 1,307,074
16256
mRNA_7889: 16257 - Hypothetical Protein, at 1,307,542 to 1,308,171
16257
mRNA_7890: 16258 - K19564 CTR, HNM1 choline transport protein, at 1,308,906 to 1,311,166
16258
mRNA_7891: 16259 - Hypothetical Protein, at 1,311,426 to 1,311,848
16259
Group
Condition
mRNA
_7887
mRNA
_7888
mRNA
_7889
mRNA
_7890
mRNA
_7891
16255
16256
16257
16258
16259
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
N.D.
N.D.
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.0
-0.3
auxotrophy
Dropout Complete
-0.0
N.D.
N.D.
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
N.D.
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
N.D.
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
N.D.
-0.1
+0.3
growth on oleic acid
YNB Glucose
+0.1
N.D.
N.D.
-0.0
+0.3
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
N.D.
+0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
N.D.
-0.1
+0.7
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
N.D.
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose
+0.1
N.D.
N.D.
+0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
N.D.
+0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
N.D.
+0.1
+0.8
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
N.D.
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
N.D.
+0.2
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
N.D.
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
N.D.
+0.2
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
N.D.
N.D.
+0.2
+0.8
growth on ypd
YPD
+0.2
N.D.
N.D.
+0.0
+1.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
N.D.
+0.3
+1.6
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