Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16260 and 16261 are separated by 970 nucleotides16261 and 16262 are separated by 278 nucleotides16262 and 16263 are separated by 1155 nucleotides16263 and 16264 are separated by 158 nucleotides mRNA_7892: 16260 - K08496 GOSR2, BOS1 golgi SNAP receptor complex member 2, at 1,312,229 to 1,313,208 16260 mRNA_7893: 16261 - KOG0928 Pattern-formation protein/guanine nucleotide exchange factor, at 1,314,179 to 1,318,508 16261 mRNA_7894: 16262 - HMMPfam-Eisosome component PIL1-PF13805, at 1,318,787 to 1,321,877 16262 mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122 16263 mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324 16264
Group Condition mRNA_7892 mRNA_7893 mRNA_7894 mRNA_7895 mRNA_7896
16260 16261 16262 16263 16264
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. -0.1 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.3 N.D. N.D.
auxotrophy YNB Glucose N.D. -0.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.0 +0.2 N.D. N.D.
growth on ypd YPD N.D. +0.1 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.3 N.D. N.D.
remove
mRNA_7892
plot		 remove
mRNA_7893
plot		 remove
mRNA_7894		 remove
mRNA_7895
plot		 remove
mRNA_7896
plot