Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16261 and 16262 are separated by 278 nucleotides
16262 and 16263 are separated by 1155 nucleotides
16263 and 16264 are separated by 158 nucleotides
16264 and 16265 are separated by 351 nucleotides
mRNA_7893: 16261 - KOG0928 Pattern-formation protein/guanine nucleotide exchange factor, at 1,314,179 to 1,318,508
16261
mRNA_7894: 16262 - HMMPfam-Eisosome component PIL1-PF13805, at 1,318,787 to 1,321,877
16262
mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122
16263
mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324
16264
mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786
16265
Group
Condition
mRNA
_7893
mRNA
_7894
mRNA
_7895
mRNA
_7896
mRNA
_7897
16261
16262
16263
16264
16265
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.1
N.D.
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.1
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.1
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.2
N.D.
N.D.
+0.1
auxotrophy
Dropout Complete
-0.1
-0.0
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.3
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose
-0.1
+0.1
N.D.
N.D.
+0.0
growth on ypd
YPD
+0.1
+0.1
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.0
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.2
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.3
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.0
+0.2
N.D.
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.3
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
N.D.
N.D.
+0.2
remove
mRNA_7893
plot
remove
mRNA_7894
plot
remove
mRNA_7895
remove
mRNA_7896
plot
remove
mRNA_7897
plot