Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16261 and 16262 are separated by 278 nucleotides16262 and 16263 are separated by 1155 nucleotides16263 and 16264 are separated by 158 nucleotides16264 and 16265 are separated by 351 nucleotides mRNA_7893: 16261 - KOG0928 Pattern-formation protein/guanine nucleotide exchange factor, at 1,314,179 to 1,318,508 16261 mRNA_7894: 16262 - HMMPfam-Eisosome component PIL1-PF13805, at 1,318,787 to 1,321,877 16262 mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122 16263 mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786 16265
Group Condition mRNA_7893 mRNA_7894 mRNA_7895 mRNA_7896 mRNA_7897
16261 16262 16263 16264 16265
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.1 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.0 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.1 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 N.D. N.D. +0.1
auxotrophy Dropout Complete -0.1 -0.0 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 N.D. N.D. +0.1
auxotrophy YNB Glucose -0.1 +0.1 N.D. N.D. +0.0
growth on ypd YPD +0.1 +0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.0 +0.2 N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.3 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 N.D. N.D. +0.2
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