Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16262 and 16263 are separated by 1155 nucleotides16263 and 16264 are separated by 158 nucleotides16264 and 16265 are separated by 351 nucleotides16265 and 16266 are separated by 218 nucleotides mRNA_7894: 16262 - HMMPfam-Eisosome component PIL1-PF13805, at 1,318,787 to 1,321,877 16262 mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122 16263 mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1,328,005 to 1,329,095 16266
Group Condition mRNA_7894 mRNA_7895 mRNA_7896 mRNA_7897 mRNA_7898
16262 16263 16264 16265 16266
growth on ricinoleic acid YNB Glucose -0.0 N.D. N.D. -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. N.D. +0.1 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. N.D. -0.2 -0.7
growth on ypd YPD +0.1 N.D. N.D. -0.1 -0.5
auxotrophy Dropout Complete -0.0 N.D. N.D. +0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. +0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. N.D. +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. +0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.1 -0.0
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. N.D. +0.2 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. N.D. +0.1 +0.5
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