Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16263 and 16264 are separated by 158 nucleotides
16264 and 16265 are separated by 351 nucleotides
16265 and 16266 are separated by 218 nucleotides
16266 and 16267 are separated by 269 nucleotides
mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122
16263
mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324
16264
mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786
16265
mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1,328,005 to 1,329,095
16266
mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1,329,365 to 1,331,583
16267
Group
Condition
mRNA
_7895
mRNA
_7896
mRNA
_7897
mRNA
_7898
mRNA
_7899
16263
16264
16265
16266
16267
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.1
-0.9
-1.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.7
-1.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
-0.4
-1.9
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.1
-0.6
-1.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.3
-0.1
-2.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.2
-0.0
-2.1
auxotrophy
YNB Glucose
N.D.
N.D.
+0.0
+0.1
-2.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.3
-0.3
-1.8
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.1
-0.5
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.1
+0.0
-1.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.0
-0.5
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.1
+0.5
-2.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
+0.1
-1.7
growth on ypd
YPD
N.D.
N.D.
-0.1
-0.5
-0.1
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.6
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.2
-0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
+0.2
+0.3
remove
mRNA_7895
plot
remove
mRNA_7896
plot
remove
mRNA_7897
remove
mRNA_7898
plot
remove
mRNA_7899
plot