Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16263 and 16264 are separated by 158 nucleotides16264 and 16265 are separated by 351 nucleotides16265 and 16266 are separated by 218 nucleotides16266 and 16267 are separated by 269 nucleotides mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1,323,033 to 1,324,122 16263 mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1,328,005 to 1,329,095 16266 mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1,329,365 to 1,331,583 16267
Group Condition mRNA_7895 mRNA_7896 mRNA_7897 mRNA_7898 mRNA_7899
16263 16264 16265 16266 16267
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.1 -0.9 -1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.7 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.4 -1.9
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.1 -0.6 -1.6
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.3 -0.1 -2.1
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.0 -2.1
auxotrophy YNB Glucose N.D. N.D. +0.0 +0.1 -2.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.3 -0.3 -1.8
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 -0.5 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.1 +0.0 -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.0 -0.5 -1.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 +0.5 -2.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.1 +0.1 -1.7
growth on ypd YPD N.D. N.D. -0.1 -0.5 -0.1
auxotrophy Dropout Complete N.D. N.D. +0.1 -0.6 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.0 -0.5
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.2 +0.2 +0.3
remove
mRNA_7895
plot
remove
mRNA_7896
plot
remove
mRNA_7897
remove
mRNA_7898
plot
remove
mRNA_7899
plot