Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16264 and 16265 are separated by 351 nucleotides16265 and 16266 are separated by 218 nucleotides16266 and 16267 are separated by 269 nucleotides16267 and 16268 are separated by 486 nucleotides mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1,324,281 to 1,325,324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1,325,676 to 1,327,786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1,328,005 to 1,329,095 16266 mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1,329,365 to 1,331,583 16267 mRNA_7900: 16268 - Hypothetical Protein, at 1,332,070 to 1,333,846 16268
Group Condition mRNA_7896 mRNA_7897 mRNA_7898 mRNA_7899 mRNA_7900
16264 16265 16266 16267 16268
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.9 -1.7 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.5 -1.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.7 -1.5 +0.7
growth on oleic acid YNB Glucose N.D. +0.2 -0.0 -2.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.0 -1.8 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.4 -1.9 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 -0.6 -1.6 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.5 -1.1 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.3 -1.8 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 -1.7 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.5 -2.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.1 -2.1 +0.9
auxotrophy YNB Glucose N.D. +0.0 +0.1 -2.1 +1.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 -0.5 -0.0
growth on ypd YPD N.D. -0.1 -0.5 -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.2 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.2 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.5 +0.4
auxotrophy Dropout Complete N.D. +0.1 -0.6 -0.3 +0.8
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.0 -0.3 +1.3
remove
mRNA_7896
plot
remove
mRNA_7897
plot
remove
mRNA_7898
remove
mRNA_7899
plot
remove
mRNA_7900
plot