Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16269 and 16270 are separated by 2352 nucleotides16270 and 16271 are separated by 211 nucleotides16271 and 16272 are separated by 511 nucleotides16272 and 16273 are separated by 416 nucleotides mRNA_7901: 16269 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 1,335,118 to 1,336,063 16269 mRNA_7902: 16270 - K13348 MPV17 protein Mpv17, at 1,338,416 to 1,339,607 16270 mRNA_7903: 16271 - K14810 DDX56, DBP9 ATP-dependent RNA helicase DDX56/DBP9, at 1,339,819 to 1,342,318 16271 mRNA_7904: 16272 - Hypothetical Protein, at 1,342,830 to 1,343,789 16272 mRNA_7905: 16273 - K00147 proA glutamate-5-semialdehyde dehydrogenase, at 1,344,206 to 1,345,846 16273
Group Condition mRNA_7901 mRNA_7902 mRNA_7903 mRNA_7904 mRNA_7905
16269 16270 16271 16272 16273
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 N.D. +0.0 -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 N.D. -0.1 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.1 N.D. +0.1 -1.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 N.D. +0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 N.D. +0.1 -0.8
growth on ypd YPD -0.0 -0.5 N.D. -0.3 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 N.D. +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 N.D. +0.3 -0.8
growth on oleic acid YNB Oleic Acid +0.4 +0.1 N.D. +0.3 -0.9
growth on ricinoleic acid YNB Glucose +1.2 -0.3 N.D. +0.3 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.4 N.D. +0.4 -0.8
auxotrophy YNB Glucose +0.3 +0.5 N.D. +0.3 -0.8
facs on lipid accumulation Sorted High BODIPY Gate +1.2 +0.4 N.D. +0.3 -1.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.0 N.D. +0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.6 N.D. +0.2 +0.0
auxotrophy Dropout Complete +0.2 +0.3 N.D. -0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.1 -0.2 N.D. +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.0 N.D. +0.4 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 N.D. +0.2 +0.4
growth on oleic acid YNB Glucose +1.3 -0.0 N.D. +0.4 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 +0.1 N.D. +0.0 -0.1
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