Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16273 and 16274 are separated by 797 nucleotides
16274 and 16275 are separated by 127 nucleotides
16275 and 16276 are separated by 641 nucleotides
16276 and 16277 are separated by 135 nucleotides
mRNA_7905: 16273 - K00147 proA glutamate-5-semialdehyde dehydrogenase, at 1,344,206 to 1,345,846
16273
mRNA_7906: 16274 - BLAST Protein of unknown function [Pyronema omphalodes CBS ..., at 1,346,644 to 1,348,770
16274
mRNA_7907: 16275 - K14951 ATP13A3_4_5 cation-transporting ATPase 13A3/4/5, at 1,348,898 to 1,356,379
16275
mRNA_7908: 16276 - K03783 punA, PNP purine-nucleoside phosphorylase, at 1,357,021 to 1,359,036
16276
mRNA_7909: 16277 - Hypothetical Protein, at 1,359,172 to 1,360,020
16277
Group
Condition
mRNA
_7905
mRNA
_7906
mRNA
_7907
mRNA
_7908
mRNA
_7909
16273
16274
16275
16276
16277
auxotrophy
YNB Glucose 75mM Arginine
-1.7
+0.3
-0.9
-0.3
-0.5
growth on ricinoleic acid
YNB Glucose
-1.3
-0.1
-0.8
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.1
-0.6
-0.5
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
+0.2
-1.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.7
+0.3
-0.7
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.8
+0.4
-0.7
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
+0.4
-0.8
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
+0.2
-1.0
-0.0
+0.2
auxotrophy
YNB Glucose
-0.8
+0.3
-0.7
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
-0.5
-0.6
-0.6
growth on oleic acid
YNB Glucose
-0.7
+0.2
-0.5
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.3
-1.0
-0.1
-0.5
growth on oleic acid
YNB Oleic Acid
-0.9
+0.1
-0.1
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.6
-0.8
+0.1
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.4
-0.2
+0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
-0.1
+0.1
-0.1
auxotrophy
Dropout Complete
+0.5
+0.3
-0.6
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
+0.1
+0.3
-0.6
growth on ypd
YPD
+0.4
-0.1
-0.0
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.3
+0.0
+0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.3
-0.1
+0.1
-0.1
remove
mRNA_7905
plot
remove
mRNA_7906
plot
remove
mRNA_7907
remove
mRNA_7908
plot
remove
mRNA_7909
plot