Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16276 and 16277 are separated by 135 nucleotides16277 and 16278 are separated by 117 nucleotides mRNA_7908: 16276 - K03783 punA, PNP purine-nucleoside phosphorylase, at 1,357,021 to 1,359,036 16276 mRNA_7909: 16277 - Hypothetical Protein, at 1,359,172 to 1,360,020 16277 mRNA_7910: 16278 - KOG3767 Sideroflexin, at 1,360,138 to 1,362,160 16278
Group Condition mRNA_7908 mRNA_7909 mRNA_7910
16276 16277 16278
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.6 -0.9
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.5 -1.3
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 -1.2
auxotrophy YNB Glucose -0.3 -0.2 -1.5
growth on ricinoleic acid YNB Glucose -0.3 -0.4 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.7 -0.5
growth on oleic acid YNB Glucose -0.2 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.6 -0.9
auxotrophy Dropout Complete -0.1 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.7
growth on oleic acid YNB Oleic Acid -0.4 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 -0.6
growth on ypd YPD +0.0 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.6 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.1
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