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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16287 and 16288 are separated by 610 nucleotides
16288 and 16289 are separated by 221 nucleotides
16289 and 16290 are separated by 514 nucleotides
16290 and 16291 are separated by 509 nucleotides
mRNA_7919: 16287 - K01489 cdd, CDA cytidine deaminase, at 22,432 to 23,509
16287
mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24,120 to 24,922
16288
mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25,144 to 26,524
16289
mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27,039 to 30,180
16290
mRNA_7923: 16291 - Hypothetical Protein, at 30,690 to 33,001
16291
Group
Condition
mRNA
_7919
mRNA
_7920
mRNA
_7921
mRNA
_7922
mRNA
_7923
16287
16288
16289
16290
16291
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
+0.1
-0.5
-0.8
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
-1.3
-0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.1
-1.1
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.5
-0.2
-1.7
+0.0
growth on oleic acid
YNB Oleic Acid
-0.4
+0.0
-0.8
+0.3
+0.0
growth on oleic acid
YNB Glucose
-0.3
-0.3
-0.0
-0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.3
-1.0
-0.3
+0.1
auxotrophy
YNB Glucose
-0.7
+0.1
-0.4
+0.4
+0.3
auxotrophy
Dropout Complete
-0.0
+0.4
-1.4
+0.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.0
-0.7
+0.8
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.3
-0.3
+0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.2
+0.1
+0.5
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.3
+0.1
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.4
+0.0
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
+0.7
-0.3
+0.2
growth on ypd
YPD
+0.1
+0.7
+1.4
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.1
+1.2
-0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.8
+0.7
+0.9
-0.8
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
+1.2
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.2
+1.9
+0.4
+0.3
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