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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16288 and 16289 are separated by 221 nucleotides
16289 and 16290 are separated by 514 nucleotides
16290 and 16291 are separated by 509 nucleotides
16291 and 16292 are separated by 1394 nucleotides
mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24,120 to 24,922
16288
mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25,144 to 26,524
16289
mRNA_7922: 16290 - K17065 DNM1L dynamin 1-like protein, at 27,039 to 30,180
16290
mRNA_7923: 16291 - Hypothetical Protein, at 30,690 to 33,001
16291
mRNA_7924: 16292 - Hypothetical Protein, at 34,396 to 34,788
16292
Group
Condition
mRNA
_7920
mRNA
_7921
mRNA
_7922
mRNA
_7923
mRNA
_7924
16288
16289
16290
16291
16292
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.5
-0.8
-0.1
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-1.0
-0.3
+0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.2
-1.7
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.1
-0.0
-0.6
growth on ricinoleic acid
YNB Glucose
-0.0
-1.3
-0.1
+0.3
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.1
-0.2
-0.2
-0.3
auxotrophy
Dropout Complete
+0.4
-1.4
+0.7
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.3
+0.5
+0.1
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-1.1
-0.2
+0.2
+1.0
auxotrophy
YNB Glucose
+0.1
-0.4
+0.4
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.0
+0.3
-0.0
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.9
-0.8
+0.2
-0.9
growth on oleic acid
YNB Oleic Acid
+0.0
-0.8
+0.3
+0.0
+0.7
growth on oleic acid
YNB Glucose
-0.3
-0.0
-0.3
+0.2
+1.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.1
+0.5
+0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.7
+0.8
+0.2
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.7
-0.3
+0.2
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+1.2
-0.1
+0.3
+0.4
growth on ypd
YPD
+0.7
+1.4
-0.7
-0.1
+1.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+1.2
+0.3
+0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+1.9
+0.4
+0.3
+0.3
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