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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16293 and 16294 are separated by 594 nucleotides
16294 and 16295 are separated by 452 nucleotides
16295 and 16296 are separated by 291 nucleotides
16296 and 16297 are separated by 111 nucleotides
mRNA_7925: 16293 - Hypothetical Protein, at 35,695 to 36,297
16293
mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36,892 to 37,805
16294
mRNA_7927: 16295 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 38,258 to 39,116
16295
mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39,408 to 40,571
16296
mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40,683 to 43,204
16297
Group
Condition
mRNA
_7925
mRNA
_7926
mRNA
_7927
mRNA
_7928
mRNA
_7929
16293
16294
16295
16296
16297
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
-0.1
-0.4
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.1
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.3
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
-0.0
-0.1
-0.1
auxotrophy
YNB Glucose
-0.0
+0.0
-0.4
+0.0
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.0
+0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.2
+0.0
-0.2
+0.1
growth on ypd
YPD
-0.1
+0.4
-0.3
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
-0.1
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
+0.4
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.2
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-0.1
-0.4
+0.1
+0.1
auxotrophy
Dropout Complete
+0.1
+0.0
+0.0
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.2
+0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.1
+0.3
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.3
+0.0
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.2
+0.0
+0.2
+0.0
growth on oleic acid
YNB Glucose
+0.5
+0.1
-0.1
+0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.4
+0.2
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
+0.4
-0.1
+0.1
+0.1
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