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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16294 and 16295 are separated by 452 nucleotides
16295 and 16296 are separated by 291 nucleotides
16296 and 16297 are separated by 111 nucleotides
16297 and 16298 are separated by 447 nucleotides
mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36,892 to 37,805
16294
mRNA_7927: 16295 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 38,258 to 39,116
16295
mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39,408 to 40,571
16296
mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40,683 to 43,204
16297
mRNA_7930: 16298 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 43,652 to 44,554
16298
Group
Condition
mRNA
_7926
mRNA
_7927
mRNA
_7928
mRNA
_7929
mRNA
_7930
16294
16295
16296
16297
16298
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
+0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
-0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
-0.3
+0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.3
+0.0
-0.0
+0.2
growth on ypd
YPD
+0.4
-0.3
+0.1
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
-0.3
-0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose
+0.0
-0.4
+0.0
+0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.1
-0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.4
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.0
-0.0
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.1
-0.1
-0.0
+0.4
growth on oleic acid
YNB Glucose
+0.1
-0.1
+0.2
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.0
+0.2
+0.0
+0.2
auxotrophy
Dropout Complete
+0.0
+0.0
+0.2
-0.0
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
-0.1
-0.0
+0.6
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
+0.1
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.0
+0.2
+0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.2
-0.1
-0.1
+0.7
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