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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16296 and 16297 are separated by 111 nucleotides
16297 and 16298 are separated by 447 nucleotides
16298 and 16299 are separated by 1476 nucleotides
16299 and 16300 are separated by 322 nucleotides
mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39,408 to 40,571
16296
mRNA_7929: 16297 - K02013 ABC.FEV.A iron complex transport system ATP-binding protein, at 40,683 to 43,204
16297
mRNA_7930: 16298 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 43,652 to 44,554
16298
mRNA_7931: 16299 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 46,031 to 46,898
16299
mRNA_7932: 16300 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 47,221 to 48,247
16300
Group
Condition
mRNA
_7928
mRNA
_7929
mRNA
_7930
mRNA
_7931
mRNA
_7932
16296
16297
16298
16299
16300
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.2
-1.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.2
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
+0.3
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.0
+0.4
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
+0.0
-0.3
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.2
+0.2
-0.2
growth on ypd
YPD
+0.1
-0.2
-0.2
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.1
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
-0.0
-0.3
+0.7
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.0
+0.2
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.1
-0.5
+1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
+0.4
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.2
-0.3
+0.2
+1.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.4
+0.1
+0.3
auxotrophy
YNB Glucose
+0.0
+0.0
+0.3
+0.3
+0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-0.0
+0.5
+0.4
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
+0.7
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.0
+0.2
+0.4
+0.5
growth on oleic acid
YNB Glucose
+0.2
+0.2
+0.2
+0.5
+0.3
auxotrophy
Dropout Complete
+0.2
-0.0
+0.4
+0.2
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
+0.6
+0.4
+0.6
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